CIRCA: Circadian gene expression profiles.

NEWS (5/16/2013): Mouse Distal Colon data sets added to CircaDB.

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(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

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			Tissue liver UCSC RNAseq RNAseq_NM_023154 Probeset 1417203_at Links Wikipedia HomoloGene Symbol Ethe1 Unigene Mm.29553 RefSeq Protein NP_075643 RefSeq DNA NM_023154 Description ethylmalonic encephalopathy 1
	p-Value	q-Value	period	phase
JTK	2.27e-16	2.23e-13	25.5	6.5
Lomb Scargle	5.45e-08	9.13045e-05	25.306	31.68
DeLichtenberg	0.0265	0.568452	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_011200 Probeset 1419024_at Links Wikipedia HomoloGene Symbol Ptp4a1 Unigene Mm.478332 RefSeq Protein NP_035330 RefSeq DNA NM_011200 Description protein tyrosine phosphatase 4a1
	p-Value	q-Value	period	phase
JTK	2.27e-16	2.23e-13	24.0	20.0
Lomb Scargle	4.25e-07	0.000161075	23.946	21.43
DeLichtenberg	0.0241	0.568452	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_007489 Probeset 1425099_a_at Links Wikipedia HomoloGene Symbol Arntl Unigene Mm.440371 RefSeq Protein NP_031515 RefSeq DNA NM_007489 Description aryl hydrocarbon receptor nuclear translocator-like
	p-Value	q-Value	period	phase
JTK	3.0e-16	2.71e-13	24.5	4.5
Lomb Scargle	2.58e-08	9.13045e-05	24.383	29.97
DeLichtenberg	0.0	0.0	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_010266 Probeset 1435749_at Links Wikipedia HomoloGene Symbol Gda Unigene Mm.45054 RefSeq Protein NP_034396 RefSeq DNA NM_010266 Description guanine deaminase
	p-Value	q-Value	period	phase
JTK	3.0e-16	2.71e-13	23.0	0.0
Lomb Scargle	4.18e-08	9.13045e-05	23.118	23.81
DeLichtenberg	0.0655	0.624533	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_173752 Probeset 1451313_a_at Links Wikipedia HomoloGene Symbol 1110067D22Rik Unigene Mm.76694 RefSeq Protein NP_776113 RefSeq DNA NM_173752 Description RIKEN cDNA 1110067D22 gene
	p-Value	q-Value	period	phase
JTK	3.0e-16	2.71e-13	23.0	5.0
Lomb Scargle	1.89e-07	0.000120269	23.118	29.81
DeLichtenberg	0.0002	0.0798248	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_001110331 RNAseq_NM_001110332 RNAseq_NM_011868 Probeset 1431012_a_at Links Wikipedia HomoloGene Symbol Peci Unigene Mm.28883 RefSeq Protein NP_001103801 NP_001103802 NP_035998 RefSeq DNA NM_001110331 NM_001110332 NM_011868 Description peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
	p-Value	q-Value	period	phase
JTK	3.0e-16	2.71e-13	24.0	18.0
Lomb Scargle	4.11e-07	0.000161075	23.946	18.27
DeLichtenberg	0.1109	0.77318	24.0	NA
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			Tissue liver UCSC RNAseq None Probeset 1435084_at Links Wikipedia HomoloGene Symbol C730049O14Rik Unigene None RefSeq Protein None RefSeq DNA None Description RIKEN cDNA C730049O14 gene
	p-Value	q-Value	period	phase
JTK	3.95e-16	3.43e-13	25.0	6.5
Lomb Scargle	4.83e-08	9.13045e-05	24.383	30.98
DeLichtenberg	0.006	0.568452	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_016974 Probeset 1438211_s_at Links Wikipedia HomoloGene Symbol Dbp Unigene Mm.378235 RefSeq Protein NP_058670 RefSeq DNA NM_016974 Description D site albumin promoter binding protein
	p-Value	q-Value	period	phase
JTK	3.95e-16	3.43e-13	24.0	16.0
Lomb Scargle	3.88e-06	0.000540098	22.725	17.24
DeLichtenberg	0.0	0.0	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_053082 Probeset 1448276_at Links Wikipedia HomoloGene Symbol Tspan4 Unigene Mm.245355 RefSeq Protein NP_444312 RefSeq DNA NM_053082 Description tetraspanin 4
	p-Value	q-Value	period	phase
JTK	5.2e-16	4.34e-13	24.0	22.0
Lomb Scargle	8.45e-08	9.13045e-05	23.946	23.45
DeLichtenberg	0.0259	0.568452	24.0	NA
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			Tissue liver UCSC RNAseq RNAseq_NM_001122683 RNAseq_NM_175177 Probeset 1452257_at Links Wikipedia HomoloGene Symbol Bdh1 Unigene Mm.293470 RefSeq Protein NP_001116155 NP_780386 RefSeq DNA NM_001122683 NM_175177 Description 3-hydroxybutyrate dehydrogenase, type 1
	p-Value	q-Value	period	phase
JTK	5.2e-16	4.34e-13	22.0	16.0
Lomb Scargle	1.49e-07	0.000113899	21.623	17.39
DeLichtenberg	0.5115	1.0	24.0	NA
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